Cannabis Accounting

Medical vs. Adult-Use Expense Allocation

Your books have to split every shared dollar between two tax worlds starting with tax year 2026. Most charts of accounts cannot do it yet. Here is what has to change before 12-31.
The short version

On 4-28-2026, state-licensed medical cannabis moved to Schedule III. Section 280E no longer applies to that activity. Adult-use stayed on Schedule I, so 280E still applies there.

If you hold both licenses, you now have to divide shared expenses between a deductible medical bucket and a non-deductible adult-use bucket. The IRS has not issued final rules on how. Your preparer will need that split in January regardless.

This is a chart of accounts problem, not a tax return problem. It has to be fixed inside your books before the year closes, because you cannot reconstruct a defensible allocation from a year of commingled transactions.

What actually changed

For fifty years every cannabis operator lived under the same rule. Section 280E blocks deductions and credits for any business trafficking in a Schedule I or Schedule II substance, leaving cost of goods sold as your only offset against revenue. That is why cannabis businesses pay effective federal rates that would put any other industry out of business.

In April 2026 that split in half. FDA-approved marijuana products and marijuana under a qualifying state medical license moved to Schedule III. Since 280E only reaches Schedule I and II, it stopped reaching those activities. Rent, payroll, marketing, and ordinary operating expenses became deductible again on the medical side.

Adult-use did not move. It is still Schedule I, and 280E still applies to it in full.

So if you operate in a dual-license state, you are now running one business under two completely different federal tax regimes, using one set of books that was almost certainly built for one.

The part nobody has answered

Mixed operators have to allocate shared costs between the two. That much is clear. What is not clear is how, because the IRS has not published final guidance on the method, and it is late enough in the year that a lot of operators are going to reach January without it.

Waiting for that guidance is the wrong move, and here is why. Whatever method the IRS eventually blesses, every one of them requires the same underlying thing: books that can tell medical activity apart from adult-use activity at the transaction level. If your ledger cannot produce that split, no guidance helps you, because you will have nothing to apply it to.

The operators who are going to have a bad January are not the ones who picked the wrong method. They are the ones who cannot produce any number at all and end up handing their preparer a spreadsheet and a guess.

Direct costs first, allocation second

The single biggest mistake I see is operators treating this as one giant allocation exercise. It is not. Most of your cost base can be assigned directly, and every dollar you assign directly is a dollar you never have to defend with a formula.

Work in this order:

  1. Direct medical. Product, labor, and costs that touch only the medical side. Assign at the source.
  2. Direct adult-use. Same on the other side.
  3. Genuinely shared. Whatever is left. Rent on a shared building, general management payroll, insurance, the accounting fee. This is the only pool that needs a method.

Get the first two right and the third pool usually shrinks to a fraction of what operators expect. That is the whole game.

The four allocation methods, and what each one costs you to defend

For the shared pool, four approaches are in common use. None is officially blessed yet. Each requires different documentation, and the documentation is the part people skip.

MethodBest forWhat you must document
Square footageRent, utilities, facility costs, depreciationA measured floor plan with dated photos. Re-measure whenever you reconfigure.
Revenue shareMarketing, general admin, insuranceMonthly revenue by license type straight out of seed-to-sale, reconciled to the ledger.
Labor hoursShared payroll, management comp, benefitsActual time records. Not estimates and not job titles.
Transaction or unit countPOS costs, packaging, compliance feesUnit counts by license type, period by period.

Two rules that matter more than which method you choose. Match the driver to the cost. Allocating rent by revenue share when medical occupies a quarter of your floor is hard to defend and easy for an examiner to take apart. And apply it consistently. Switching methods mid-year because one produced a better answer is the fastest way to lose the whole allocation.

What your chart of accounts has to do

Here is where this stops being theory. A workable structure has three dimensions running at once:

In QuickBooks Online that usually means classes carrying the license track and locations carrying the department, or the reverse depending on how your entities are structured. The mechanics are less important than the discipline. Every transaction gets tagged at entry, not sorted out in December.

The shared pool gets its own set of accounts so it is visible rather than buried. At period end the allocation runs as a documented journal entry with the driver attached, which means a year later you can show exactly how the number was built. That last part is what makes it survive an examination.

One more thing worth saying out loud: your COGS discipline on the adult-use side did not get any less important. Half your business is still living under 280E, and cost of goods sold is still the only thing standing between it and a brutal effective rate. Rescheduling made your books more complicated, not simpler.

What to do before 12-31-2026

  1. Find out whether your books can answer the question at all. Run a P&L split by license track. If you cannot produce one, that is your answer and you have roughly one quarter to fix it.
  2. Rebuild the tagging structure so every transaction carries a license track and a department from the moment it enters.
  3. Reduce the shared pool by pushing everything that can be directly assigned out of it.
  4. Pick a driver for each remaining shared cost and write down why. One page. That page is your defense.
  5. Catch up year to date. This is the painful one. Transactions from January forward have to be re-tagged, and it is much cheaper in October than in March.
  6. Hand your preparer a clean split, not a shoebox. Their job is the return. Producing the number is yours.

Questions I get asked

Does rescheduling mean I can stop worrying about 280E?
Only for the medical side, and only if you hold a qualifying state medical license. Adult-use is still Schedule I and 280E still applies to it. If you hold both, you now have both problems at once.
Can I just wait for IRS guidance?
You can wait to pick a method. You cannot wait to fix your books. Every possible method needs transaction-level separation underneath it, and that separation has to exist before the year closes. Guidance arriving in February does nothing for a ledger that commingled everything in July.
What about the 280E tax I already paid in prior years?
Amounts assessed for earlier 280E years are still legally owed, and the IRS has been fighting refund claims built on rescheduling. Treat retroactive relief as a maybe, not a plan, and talk to your tax counsel before filing anything protective.
My bookkeeper says we can sort it out at year end. Are they right?
No. Allocation reconstructed from memory after the fact is the version that falls apart under examination. The whole point is a contemporaneous method applied consistently, with the driver documented as you go.
Are you a CPA?
No, and I do not file your return or give you a tax position. I build the accounting structure that lets your CPA take one. I work alongside your preparer, not instead of them.
Can your books answer the question?

If you are not sure, that is worth thirty minutes. I will look at how your chart of accounts is structured and tell you straight whether it can produce a license-track split for 2026, and what it would take if it cannot. No charge and no pitch.

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This page describes accounting structure and reporting readiness. It is not tax or legal advice, and it is not a tax opinion on your situation. Federal cannabis tax treatment is actively changing and IRS guidance for mixed operators was still outstanding as of September 2026. Work with your tax counsel or CPA on any filing position.